Insertion junction: CLIP2.004418_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004418
Chromosome:chromosome 10
Location:1001573
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g424775 CTP2,PCH1,PAA1 Copper transporting ATPase and Cu chaperone for CTP1; (1 of 1) PTHR24093:SF124 - COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTCCGCCTCCAACCCCAGCCCATCAACGTGCCAAACTGGGCGGCAGG
Internal bar code:GCTGGTATGAGGCTTAACGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:427
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGCATTCAGAGTAGGGGA
Suggested primer 2:AGGTGTGTGTGTGTGTGTGT