Insertion junction: CLIP2.004421_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004421
Chromosome:chromosome 3
Location:8831093
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206369 (1 of 107) IPR000719//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGGTACCTGATCATCCGCCCTGGTTCACCTTTGTGGCGCCTGTCGTC
Internal bar code:ACTCATATGATTTGCGGTTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4611
LEAP-Seq percent confirming:96.25
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTACCCACCACGTGTACC
Suggested primer 2:GCTGTGGCTAGAGTGCATCA