Insertion junction: CLIP2.004422_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004422
Chromosome:chromosome 16
Location:1939579
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656200 (1 of 1) PF00612//PF13424 - IQ calmodulin-binding motif (IQ) // Tetratricopeptide repeat (TPR_12) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGACGGCTGTCACGTGGCGTAGCGTTCAAGCATGACACCGGGGGGTTT
Internal bar code:TACGATAACGCCGGGCGCAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:921
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAAAGCTCAAAGCCACAC
Suggested primer 2:GTTTGTGGACTTGGTGTCGC