Insertion junction: CLIP2.004427_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004427
Chromosome:chromosome 12
Location:2206735
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g509001 RPK2 RNA-polymerase-subunit kinase; (1 of 2) PTHR24055//PTHR24055:SF10 - MITOGEN-ACTIVATED PROTEIN KINASE // MITOGEN-ACTIVATED PROTEIN KINASE 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCACGCTAAAAGCGAGAGATAATCGAGGACGGAGGTACAGACATGGG
Internal bar code:ATCTGGGGGCAGGACTAACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1140
LEAP-Seq percent confirming:56.6667
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AACCCCACAGCCTGCTAATC
Suggested primer 2:CAGCAGTCGATCTAGCAGGG