Insertion junction: CLIP2.004431_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004431
Chromosome:chromosome 7
Location:1188919
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g321250 3'UTR
Cre07.g321300 (1 of 3) PF03703 - Bacterial PH domain (bPH_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGAAGAAAGATGGCTCTGCCTCTCAAAATTGGTTACAAGAGGGACCT
Internal bar code:GAAGAGTTTACCCGGAGGGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1041
LEAP-Seq percent confirming:71.875
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGCCACATGCTGTAGGTG
Suggested primer 2:GCCACCATTCGCATGTGATC