Insertion junction: CLIP2.004431_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004431
Chromosome:chromosome 7
Location:1188922
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g321250 3'UTR
Cre07.g321300 (1 of 3) PF03703 - Bacterial PH domain (bPH_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAATAAAACACCGCTGCACGGGGGCTCAAGCAACCAGCAACAGCACAAG
Internal bar code:GAAGAGTTTACCCGGAGGGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3514
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACCATTCGCATGTGATC
Suggested primer 2:TCTGCCACATGCTGTAGGTG