Insertion junction: CLIP2.004444_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004444
Chromosome:chromosome 11
Location:3326949
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g476650 PUL1,PU1 Pullulanase-type starch debranching enzyme 1; (1 of 1) 3.2.1.142//3.2.1.41 - Limit dextrinase / R-enzyme // Pullulanase / Pullulan 6-glucanohydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGATGCACTGAAGACTGCGGACGAAGTCGTTACCACATTTGCGGCCGT
Internal bar code:TAGCCTGCTATAGGTCACCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1392
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCCGCATGTATCTGTACC
Suggested primer 2:TGCGTGTCGAAAAGCACAAG