Insertion junction: CLIP2.004449_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004449
Chromosome:chromosome 4
Location:372287
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217909 OPR124 OctotricoPeptide Repeat protein 124 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCAGCAGCCTCAGCGGCGCCGGAGAGGGCCCCCCACTCGCTGAGCAGC
Internal bar code:GTTTAATTTTGTTACCTTCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2075
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTTGTTGTTGGTGGTGG
Suggested primer 2:CACGTAGCAGGCTAGCCTAC