Insertion junction: CLIP2.004451_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004451
Chromosome:chromosome 1
Location:5432114
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038350 (1 of 39) IPR009003 - Peptidase S1, PA clan intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGGAAGGGAGACTGTAGGCACCAGAGTTACCGGTGCAACTTTGGAAT
Internal bar code:GGAAGTCTATCACTCGAGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5933
LEAP-Seq percent confirming:97.8723
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCTACCTCGCACCATAC
Suggested primer 2:GATCCATTGCTAGCGGACGA