Insertion junction: CLIP2.004454_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004454
Chromosome:chromosome 16
Location:5819354
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679950 RFC3 DNA replication factor C complex subunit 3; (1 of 1) PTHR11669:SF1 - REPLICATION FACTOR C SUBUNIT 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACCCCAGCCGCCGCGCCCCACAAGCCCAGCGCCACGCCCTACTGTAAC
Internal bar code:CACTCTCACAATCGTTTCTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:574
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCATACCTGCTCTCTGCT
Suggested primer 2:AACGAGTTGAGGGACGTCAC