Insertion junction: CLIP2.004456_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004456
Chromosome:chromosome 17
Location:3274423
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721950 (1 of 1) PTHR11685:SF119 - E3 UBIQUITIN-PROTEIN LIGASE ARI2-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCCCGCGAACCCGGAGCGCGCTCACCGCTTGACGCCCTCCTTGCTGTA
Internal bar code:TGTGATCAATGCTCTGGAAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3718
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:AACCGGCAATGCTTTGTGTC
Suggested primer 2:AATACCCCAACGCCTCCTTG