Insertion junction: CLIP2.004458_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004458
Chromosome:chromosome 17
Location:2021278
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g710800 NFU3,NIFU3 (1 of 3) PF01106 - NifU-like domain (NifU); iron-sulfur cluster assembly protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGTCCCGGCCCCGGTCGCGGCGCGCCCCCCCCCCCCCTGCCTCAGG
Internal bar code:GAAAAAAGGGATATAGACGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1655
LEAP-Seq percent confirming:60.5263
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTTTCAGGCACACACAG
Suggested primer 2:CTGGCCATCAAGGTGGGATT