Insertion junction: CLIP2.004459_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004459
Chromosome:chromosome 6
Location:1737536
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g262900 PFK1 (1 of 3) K00850 - 6-phosphofructokinase 1 (pfkA, PFK); Phosphofructokinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCCCGGCACATGGCTGACGGTCGTTGCGCCGTGGTGATGTTCGCAAGT
Internal bar code:TTGGGCATGGTCCTCGGCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:458
LEAP-Seq percent confirming:5.26316
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCTTATGACACGCATGC
Suggested primer 2:CCACTTCCATCAGTGCGACT