Insertion junction: CLIP2.004470_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004470
Chromosome:chromosome 12
Location:5616117
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531350 CGL62 putative cell cycle associated protein; (1 of 3) PF10497 - Zinc-finger domain of monoamine-oxidase A repressor R1 (zf-4CXXC_R1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTAAACTTGCACATACGCCGGACTTTTGCCCGTCGCACTGTCAGAGCA
Internal bar code:CGGATTTCACCTTGGTCTTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1920
LEAP-Seq percent confirming:73.6842
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCAGAGGAGGGTAGTGA
Suggested primer 2:TCACTGGTGATCTTGCCGAC