Insertion junction: CLIP2.004473_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004473
Chromosome:chromosome 2
Location:4499460
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g106650 CDPK7 (1 of 6) PTHR24349//PTHR24349:SF23 - SERINE/THREONINE-PROTEIN KINASE // MAP KINASE-ACTIVATED PROTEIN KINASE 5; Calcium/calmodulin-dependent protein kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGCGTTGTGCAGGGGTGACAGCCGCATGAGGCGAGGCATGCCGGCGC
Internal bar code:AATGGGTCAGTCAGGTTTATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:5270
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTTCGGAGGAGGTTTCGG
Suggested primer 2:CCACTGCCACTGGGTGATT