Insertion junction: CLIP2.004483_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004483
Chromosome:chromosome 1
Location:2188463
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g012200 (1 of 3) PF00651//PF03110 - BTB/POZ domain (BTB) // SBP domain (SBP) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGCGGAATGGCTCCCACCTACCTACTTTACAACCTGGACGGCAAGGC
Internal bar code:GCATTTAGAAAGGATAGGGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:6139
LEAP-Seq percent confirming:97.8723
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TTGACAGCTGACCGGGTAAC
Suggested primer 2:AGTTGCAAGCAGTGAAAGCG