Insertion junction: CLIP2.004489_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004489
Chromosome:chromosome 8
Location:3125824
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g375950 EXR1 (1 of 1) PF13474 - SnoaL-like domain (SnoaL_3); UvrB containing protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTACAGGTGGTGCTGGAGGATGTGCGTGTGTACGCCCGTGAGGACTTT
Internal bar code:TTGCCATTGCTTTCTCGTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2004
LEAP-Seq percent confirming:23.3333
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCGGTTTCTTACGCTTCC
Suggested primer 2:TGTTTTGGGGCTTGAGTGGT