Insertion junction: CLIP2.004496_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004496
Chromosome:chromosome 10
Location:3070983
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441150 3'UTR
Cre10.g441200 LAL3 La-domain RNA-binding protein; (1 of 1) K18757 - la-related protein 1 (LARP1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTACTCCCGTACTCAAGGAGTAGATGCGTTTGTCCATTACGGCGCGGT
Internal bar code:ACCTAGGGCTCTTTAATTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2954
LEAP-Seq percent confirming:97.1154
LEAP-Seq n confirming:101
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:104

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTGCTATAGATGCGCGG
Suggested primer 2:CGATACCTGCACCCTGTGTT