Insertion junction: CLIP2.004499_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004499
Chromosome:chromosome 11
Location:2081329
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467755 SNE17 (1 of 10) PF13460 - NAD(P)H-binding (NAD_binding_10); Extended short-chain dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCACGAAGGTCCCGGGAGTGATGGCATAAAGTCGGTACTCGCCCCCAG
Internal bar code:TGGTTTATGCATCCATATCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1003
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TACCGCCACATGTTCTCCAC
Suggested primer 2:TTGGCTCCGATGCTTTTCCT