Insertion junction: CLIP2.004500_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004500
Chromosome:chromosome 12
Location:3567602
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496250 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGCAGCGGCGGTGCTGGCGGCGAGTGCGATGCTGCTCAGCTCGCCAC
Internal bar code:GTCAGGGCTATATCTTGGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1904
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AATTGTCCTGCAGCGACTGA
Suggested primer 2:GGGGTTCAGCACTACCGAAA