Insertion junction: CLIP2.004502_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004502
Chromosome:chromosome 1
Location:5235669
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036650 (1 of 4) PTHR24347:SF138 - PROTEIN F32D8.1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGACACGAGAGGCATGCCGTGGCTGTGCAGCACAAGGCGGCGCCTAA
Internal bar code:CAAAATTTCGGAGACTGGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5469
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGTCATGTCGCGATCTCC
Suggested primer 2:TCCAAGCGCATTGACTCCTT