Insertion junction: CLIP2.004502_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004502
Chromosome:chromosome 17
Location:4085020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728850 RAA15 component psaA trans-splicing sub complex II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCCTCACGCATCCCGCATGCCTGATGCATAACATGCGGCGCGCGGGT
Internal bar code:GGTGCCGAATATATATGGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1314
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTTGGAACCGCATGTTT
Suggested primer 2:AACATGCACGCTGTCAAACC