Insertion junction: CLIP2.004509_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004509
Chromosome:chromosome 13
Location:1284708
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g570900 MSRA1 (1 of 2) PTHR10173:SF6 - PEPTIDE METHIONINE SULFOXIDE REDUCTASE; Peptide methionine-S-sulfoxide reductase, msrA-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTGCCAGAAATCCACGCCGAGTGGGCAAGAGCCTGAAACCACGGACC
Internal bar code:ATTCGGTGCGACAATTCGTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1426
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTATGGCGATCGGACTGAGG
Suggested primer 2:GCAGGTCCTCGTACGAGATG