Insertion junction: CLIP2.004512_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004512
Chromosome:chromosome 3
Location:8800132
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206929 RSE4,EGY1 (1 of 1) PTHR31412:SF0 - ZINC METALLOPROTEASE EGY1, CHLOROPLASTIC-RELATED; membrane associated metalloprotease involved in chloroplast development 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCGCCACGCTTCCCACGTCGCTTCCGATGCAACACCGCATAGCAGACG
Internal bar code:GATCCCCGTTTAAAACGAGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1296
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTAACATTCTGAGCGCGG
Suggested primer 2:ACGCGTCGACAACTTCTTCT