Insertion junction: CLIP2.004512_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004512
Chromosome:chromosome 3
Location:8800135
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206929 RSE4,EGY1 (1 of 1) PTHR31412:SF0 - ZINC METALLOPROTEASE EGY1, CHLOROPLASTIC-RELATED; membrane associated metalloprotease involved in chloroplast development 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCGTGTCGGTCGCACCACAGCCTCCCTGCCCGTCCCTGCCATGAACA
Internal bar code:CGGTCTTGATATGTTGTGGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2944
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCGTCGACAACTTCTTCT
Suggested primer 2:CGTTAACATTCTGAGCGCGG