Insertion junction: CLIP2.004514_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004514
Chromosome:chromosome 16
Location:3904263
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g689150 SQD3,GTR23 Sulfoquinovosyldiacylglycerol synthase; (1 of 2) K06119 - sulfoquinovosyltransferase (SQD2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCATGTGGAGTGTGGAGGCAGGAAGGCATGGATTTCGAGGATTGCGGGT
Internal bar code:ATATATTATGCCTAATCGATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3569
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGATTGGTGGCATTGCGG
Suggested primer 2:CAACGGGTCGTCAACAACAC