Insertion junction: CLIP2.004517_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004517
Chromosome:chromosome 14
Location:1546175
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g618050 PLP3,PLAP3 Plastid lipid associated protein 3; (1 of 17) PF04755 - PAP_fibrillin (PAP_fibrillin) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGCAGCGGCGGATCGGGCGGCTACCTACAAAACGTCATCACCTTCCCA
Internal bar code:AGCGTTCGGGAGTGGTCCCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1021
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGTCAAGTCGAACGCAT
Suggested primer 2:ACACTCACAGTCGACGGTTC