Insertion junction: CLIP2.004522_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004522
Chromosome:chromosome 7
Location:2071821
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g326010 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAAGTCAAGCACCAATGGACGACTCGTGTGCCCACGCATCCCAATGG
Internal bar code:GTTTAACGGTGGGATATATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1270
LEAP-Seq percent confirming:75.8621
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGTACCGACGAGTTGCTG
Suggested primer 2:CTTGGAGCCTGTTTTGGTGC