Insertion junction: CLIP2.004524_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004524
Chromosome:chromosome 2
Location:5707276
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g116250 (1 of 1) PTHR28055//PTHR28055:SF1 - FAMILY NOT NAMED // ALTERED INHERITANCE OF MITOCHONDRIA PROTEIN 41, MITOCHONDRIAL 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGCCGGACCATCGCCACCCGATGCAGGGTGCCGGCTCTCCCGCCTTC
Internal bar code:CAAACGAGGGGGGATTGCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1201
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCTCCCAGGCATGAAGA
Suggested primer 2:CGTTCACAGCAGCGTATTCG