Insertion junction: CLIP2.004531_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004531
Chromosome:chromosome 6
Location:2885134
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g272650 LHCA8 Light-harvesting protein of photosystem I; (1 of 3) K08911 - light-harvesting complex I chlorophyll a/b binding protein 5 (LHCA5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATTCGTGTTCGTGGATGGGATATACCCGTTGGTGCCTGCCGCGGAATG
Internal bar code:GGTGGTCGATATATAAAGGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4222
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGGGCATTTACAGGAAGG
Suggested primer 2:GGCTGCAGTATGACAATGCG