Insertion junction: CLIP2.004554_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004554
Chromosome:chromosome 16
Location:6237117
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676450 CPLD39 Conserved in the Plant Lineage and Diatoms CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGCATCCACGGTGAGGCAGGCCCAGTGCGGCCCAAGGCCTCGCGCTCT
Internal bar code:GACCTACATCAAGCATAGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:416
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTGTGAGGCTGTACATG
Suggested primer 2:CTCCCGTCAAGACCATGGAC