Insertion junction: CLIP2.004559_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004559
Chromosome:chromosome 12
Location:1559706
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g487500 CGL61,NYE1, SGR1 Chlorophyll a dechelatase; (1 of 1) PTHR31750//PTHR31750:SF4 - FAMILY NOT NAMED // PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGTGGCTGCAACCCGGCCCGCCTCGCAAGACGTCCAGCGCTGGGCTT
Internal bar code:ACCTCGAGACACCGTTGTCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2797
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCGTGTGTGAATTGGTTT
Suggested primer 2:ACGGCTATTCGTTGAACGGA