Insertion junction: CLIP2.004560_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.004560
Chromosome:chromosome 1
Location:5051651
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035100 (1 of 1) 5.4.99.18 - 5-(carboxyamino)imidazole ribonucleotide mutase / N(5)-carboxyaminoimidazole ribonucleotide mutase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGATCATGGGCGCACATTGTCCCCACCACCTCCCAACCTAGACTCAG
Internal bar code:TTCCGCTTACAGAGCTGCTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2628
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTATGGTGCTGCTTGTGT
Suggested primer 2:CGAAATGATGAGTGCAGCGG