Insertion junction: CLIP2.004574_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004574
Chromosome:chromosome 2
Location:7656625
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g147550 (1 of 2) IPR009057//IPR017877 - Homeodomain-like // Myb-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTTCGACGACGACCACCTCGAGCAGGAGCAGCAGGAGCGCGACGCAGA
Internal bar code:TTTATGCTTATTGCATGTTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:903
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGATACGCTTAGCCGGG
Suggested primer 2:GAGTCGGTAGGATGCGGAAG