Insertion junction: CLIP2.004578_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004578
Chromosome:chromosome 2
Location:8015943
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g144850 CGLD26b,CGLD26 Conserved in the Green Lineage and Diatoms intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCTGTGCAGGCATGCCACCCGGCCTCACCTCCACGGCCACGGACGCAA
Internal bar code:AGCGATGCTCTGAATTTAGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2531
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGCCACATACCCAGTTAC
Suggested primer 2:GAGAAACACGACGGTCAGGT