Insertion junction: CLIP2.004579_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004579
Chromosome:chromosome 1
Location:4433717
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g030250 (1 of 1) 3.1.3.57 - Inositol-1,4-bisphosphate 1-phosphatase / Inositol polyphosphate 1-phosphatase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTGTGAACTGAGACGTGTGGCAGTAGCAGTGACCTGAAGGTGTTGCAC
Internal bar code:AGGCCGTTTTTACACCAAATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1674
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTCTCTCGGTTGTTGGCA
Suggested primer 2:TGGGAGCGCGAATGTAAGTT