Insertion junction: CLIP2.004583_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004583
Chromosome:chromosome 3
Location:5993140
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189500 (1 of 3) K03574 - 8-oxo-dGTP diphosphatase [EC:3.6.1.55] (mutT, NUDT15, MTH2) 3'UTR
Cre03.g189550 ZIP3,CrZIP8 (1 of 1) PTHR11040:SF46 - PROTEIN ZNTB; Zinc/iron transporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGTGCAACACCCTGGCCCCCTTCCCACTACCGGCTGCTTTCCCCCTC
Internal bar code:GGTAAGGCAGTAAATCAGACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:921
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGCAGTAACGCACACAA
Suggested primer 2:GAAGTTCAACGGGTGTGTGC