Insertion junction: CLIP2.004592_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004592
Chromosome:chromosome 2
Location:4531744
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g106950 (1 of 6) PTHR22916//PTHR22916:SF9 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCCGGCAATGCCATGTGTAGGAGGGCGTGGGGCCGATCCCCCCGCGT
Internal bar code:GGCAGAGTGATAGACCCTACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:410
LEAP-Seq percent confirming:21.0526
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAACCGTGTGAAACCGTG
Suggested primer 2:GACAATCGCGTCTTGCCATC