Insertion junction: CLIP2.004593_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004593
Chromosome:chromosome 1
Location:2412285
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g013801 SXD1,TCY1 (1 of 1) 5.5.1.24 - Tocopherol cyclase; Tocopherol cyclase 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAACAAACACACAGGTGGGCGGCGGCCCCTGGTGGAGTGCCTGGCGCG
Internal bar code:TCCATGATAATTGTGCTTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3303
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTGACTGCACAGAAGAT
Suggested primer 2:CACCACACTGCCTAACCACT