Insertion junction: CLIP2.004597_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004597
Chromosome:chromosome 11
Location:2205377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467724 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCCACGTAGCGCTACTGACCTCACATTTCCAGCCCTGCTGCATGACC
Internal bar code:ATTTACAATGCGGCCGCCCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1965
LEAP-Seq percent confirming:75.5102
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TAATGCTTCGCCACCCCATT
Suggested primer 2:AGATTGGCACAGCAGAGGAC