Insertion junction: CLIP2.004603_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004603
Chromosome:chromosome 2
Location:6487555
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388750 TEF21 (1 of 1) PTHR11200:SF170 - PHOSPHOINOSITIDE PHOSPHATASE SAC1; Phosphoinositide phosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGTCCTTGTGCTCCTTGGTGCTGTGTCACACCGCGTGTTGAACATGCC
Internal bar code:GTAGGTGAAGAGCTATCGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1321
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TAAACCCACTCGGCTTCACC
Suggested primer 2:GCCGTGGAGAAGGAGTTCAA