Insertion junction: CLIP2.004604_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004604
Chromosome:chromosome 6
Location:8814435
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g311350 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATATACGGAAACAGCTACTTATAGCTTGTAGAGCAGAACTTTGTGGCCA
Internal bar code:CCCATGTAGCTGAATTCGAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1673
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GAAATGGCGCGGTAAACCTC
Suggested primer 2:GTAACTTCCAAGCTGCGTGC