Insertion junction: CLIP2.004609_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004609
Chromosome:chromosome 11
Location:1237470
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467692 (1 of 5) PF07466 - Protein of unknown function (DUF1517) (DUF1517) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGGAAGAAGCCGAGGAGGAGGGCTGCGGGCGCGCCGCCAGGAGGATGG
Internal bar code:GAGGACGTGTTGCCTTGGTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:935
LEAP-Seq percent confirming:68.8889
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGTATGGGAGACTGCGG
Suggested primer 2:GCGTCTACCTCATTCCTCGG