Insertion junction: CLIP2.004609_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004609
Chromosome:chromosome 11
Location:1237471
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467692 (1 of 5) PF07466 - Protein of unknown function (DUF1517) (DUF1517) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAAACACAGCGCCGACTCCGAGCCAGCCCTTCTGGGGCTCCGGTATGCC
Internal bar code:GAGGACGTGTTGCCTTGGTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1065
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTCTACCTCATTCCTCGG
Suggested primer 2:GGATGTATGGGAGACTGCGG