Insertion junction: CLIP2.004611_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004611
Chromosome:chromosome 17
Location:2219401
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g712800 5'UTR
Cre17.g712850 TRX23,TRL9 (1 of 11) IPR012336//IPR013766 - Thioredoxin-like fold // Thioredoxin domain; Thioredoxin-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCCAGGGACGTCCATGCAGGCTCATCCCTTTCCCCGGCGCAGCACAT
Internal bar code:TATGATCTTGTATGAAACCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:971
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGTGTGTACGGTAGGC
Suggested primer 2:CCTCAATCAGGCGTTGCAAC