Insertion junction: CLIP2.004624_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004624
Chromosome:chromosome 16
Location:2422721
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659850 CGL37 conserved protein related to shikimate kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTGAGACGGGAGCAGAGGGGGGGGGCGCAGGGGAGGGGCAGGGTGCGC
Internal bar code:ATTTTTGGAACGAAGTATAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:244
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGGTGAGCAAAAGCAGCA
Suggested primer 2:AAGTCATGTCAGCAGTGCGA