Insertion junction: CLIP2.004627_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004627
Chromosome:chromosome 8
Location:4236291
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g384150 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAGGATCCAGGCCGCACCGAGCCCAGCGGCGCGTAGGAGCCGCCGGCC
Internal bar code:TCCCCCGTTTACTAGGGCGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1728
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GATACCGGAAGCGTGCAAAC
Suggested primer 2:TGTTGCTGGTGTTGTTGCTG