Insertion junction: CLIP2.004632_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004632
Chromosome:chromosome 17
Location:1012325
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g703200 (1 of 3) IPR001071 - Cellular retinaldehyde binding/alpha-tocopherol transport intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTGGTTAGGGGCCCGCCGGCGGTCCTCGTGAACACGCAACAGCCTTT
Internal bar code:TAATGAGGCGCACCGCCAGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2015
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGAAGGAGGTTGAGGCAT
Suggested primer 2:CATGTGGTAGAAGTGCGGGT