Insertion junction: CLIP2.004635_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004635
Chromosome:chromosome 7
Location:4075794
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g340650 CGL149 Conserved in the Green Lineage; (1 of 1) PF09430 - Protein of unknown function (DUF2012) (DUF2012) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCAGGAGCCTGGGGTGCGGCTGCAGCTGCGGGACGGGCCAACCGCGG
Internal bar code:CGCGTCTTAATGCTACCGGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3143
LEAP-Seq percent confirming:93.3649
LEAP-Seq n confirming:197
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:211

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCCAAATGCTGTCAACCG
Suggested primer 2:TCATGGAGGGATAACGGGGT