Insertion junction: CLIP2.004638_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004638
Chromosome:chromosome 4
Location:385471
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217911 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCAGTGGGAGGCGGGGCCACCATCCAGGTTCGTCTCCTTTCCACGAAA
Internal bar code:AGATTAAGCTGCACCTTCGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:984
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGTACTCTTGTGACACGCCA
Suggested primer 2:CTGGCCAAACTGTTGAACCG